CDS

Accession Number TCMCG057C22516
gbkey CDS
Protein Id XP_018487402.1
Location complement(join(1260851..1261381,1261619..1261726,1261835..1261949,1262096..1263381))
Gene LOC108857889
GeneID 108857889
Organism Raphanus sativus

Protein

Length 679aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018631900.1
Definition PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description U11 U12 small nuclear ribonucleoprotein 48 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13156        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGATCGACCACCGTCGTTTCCTAATCCAAACTTCTTCCACCGACCTCCTCCTCCTCCTCCTCTAAATTCTAATCCAAACTTCTTCCACCGAGCTCCTCCTCCTCCTCTGCAAACTCCCAACACTTACTCCAACGCTCCGTCTCCGCCACCGATTCGCGAGCTCTCCAGTACACTCTCCTCTCTACAGTCTCTATTATCGGAATGTCGACGCACATTAGATTCTCTCTCGGATAATCTAGCTTTTAAACACTCTTCTCTTCTCCACAAGGACTGTTTCGTTCGGTGTCCTTTTGATCCAAATCACCTTATGCCACCAGAAGCTCTCTTCCTCCATTCACTTCGTTGCCCAAAGCCTCTCGATCTCACTCACCTACTTGGATCCTTTAGTAGCTACAGAAACACGCTCGAGTTACCGTGTGAACCGGAGCCGAATAACGGCGACGGTGACCTCTGTTTCTGCTTAGATGACGTCACAGATTTCGGGAACAATTTCTTTTACAATGATTGCCCTGGAGCTGTTAACTTCTCTGAGCTTGATGCTAAAACGCTACGTTTTACACTTCCTAGTGTTCTATCCGTGGAATGCTGCGAGTTTGTAGGTTCTCCTGTGTTGGAGAAATCGTTAGGGCTCTTGCCGTCTGATGTTTGCGCGATAAAACGTGAGATTGGAGGATGGAGTGATTACCCAAGTTTTTATTCCTATAGTGTTCTATGTTCGATTCTTGGTTCAGAAGTGGTTGAAATGAGTGAGTTAAGGACATGGATTCTGGTGAATTCAACGAGATACGGTGTTATAATCGATACATACATGAGGGATCATGTTCTATTGCTGTTTAGGTTGTCTATGAAAGCGGTTGTTAAGGAAGCTTGTGGGTTTATGAGAGAGTATGATCACAATGCCGCTGGTGAGCAGAGCTGCAAAAGCAGAACATTCCAGTGTCCAGTTGTGTTTCGAGTGTTGTCTTGGTTAGCTTCTCAGCTTGGCGTGTTGTATGGGGAAGGAAATGGGAAGTATTTTGCTCTGGACATGTTGAAACACTGCATTGAAGTATCTGCCTCTCATATTATGTTGTTTCGGTCACCTGACTCCGCTGGTGTTCTCAAAGATTTGGATGATGCAAACTTCAGTAATGAGGATGTGAAGACTGGTAAAACTTTGGACAGTGGTCAGGTGATATCTGTGTCCCGTGTGGCAGCAGCTGTTGCAGCGTTGTATGAAAGATCCATGCTTGAAGGAAAAATAAGAGCAATTCGATATGCACAACCACTAACAAGATATCAGCGGGTAGCTGAGCATGGTGTTTTGACAGCTAAAGCTGTTGAGGAACGGAAAGGACGTCCTAGCTACCGACCTATTATTGATCACGATGGTCTTCCCAGACAACGCTTATCAAATGAGGATATGAATAAAATGAAGACAAGAGAAGAGCTATTAGCTGAAGAGAGAGACTACAAGCGTCGAAGAATGTCATACCGTGGTAAAAAGGTGAAACGAACTCCTCGACAGGTGTTGAGTGATATGATAGAAGAATTTACAGAAGAAGTTAAGTTAGCAGGAGGTATCGGATGTTTTGAGAAGGGAATACCATTACACTCCTCATCTTCTATAAGCAAGGATCATAAAGAAATCGACTCTGAATACAATTCTGTATCCACAGCATTAACAGACGCATCACCAAGATCCTATAAGCAATGGAAAGGAGAGAATCATGCAGATAGCGAGTATTCAACGGATATTAGAACCAATACAGATAAGAGAAACCGGTATGAGGAATATGATTCAGGCAGCTCGGAGAGACAACAGAGTCACAGATCATACAAGCGCAGTGATCGAAGAGATGATGAATTCAAAAGGACCAAACGACGTAGCCACGAAAGGGAATCTTATCATCAAAACCACAGATCGTCCCATGAAAAGAGTTCTTCAGATTACAAGACCAAAAGGGATGATCGTTATGACAGCCGCCGCAGTAAGGAACCTAGGAAACAGAACTCGTTTGAAGATAGATACAATCCATTAGAAAGAGATTTAAGTTAA
Protein:  
MDRPPSFPNPNFFHRPPPPPPLNSNPNFFHRAPPPPLQTPNTYSNAPSPPPIRELSSTLSSLQSLLSECRRTLDSLSDNLAFKHSSLLHKDCFVRCPFDPNHLMPPEALFLHSLRCPKPLDLTHLLGSFSSYRNTLELPCEPEPNNGDGDLCFCLDDVTDFGNNFFYNDCPGAVNFSELDAKTLRFTLPSVLSVECCEFVGSPVLEKSLGLLPSDVCAIKREIGGWSDYPSFYSYSVLCSILGSEVVEMSELRTWILVNSTRYGVIIDTYMRDHVLLLFRLSMKAVVKEACGFMREYDHNAAGEQSCKSRTFQCPVVFRVLSWLASQLGVLYGEGNGKYFALDMLKHCIEVSASHIMLFRSPDSAGVLKDLDDANFSNEDVKTGKTLDSGQVISVSRVAAAVAALYERSMLEGKIRAIRYAQPLTRYQRVAEHGVLTAKAVEERKGRPSYRPIIDHDGLPRQRLSNEDMNKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLSDMIEEFTEEVKLAGGIGCFEKGIPLHSSSSISKDHKEIDSEYNSVSTALTDASPRSYKQWKGENHADSEYSTDIRTNTDKRNRYEEYDSGSSERQQSHRSYKRSDRRDDEFKRTKRRSHERESYHQNHRSSHEKSSSDYKTKRDDRYDSRRSKEPRKQNSFEDRYNPLERDLS